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Glossary · Genetics and breeding

Phenotype

The phenotype is what a plant visibly and measurably is (shape, colour, smell, chemistry, timing), the result of its genotype acting in a particular environment.

Also written phenotypesphenotypic expressionobservable traits

EstablishedDraft: awaiting expert reviewUpdated

The phenotype is the set of observable traits of a plant: height, leaf shape, flowering time, aroma, resin, cannabinoid profile, pest resistance. It is produced by the genotype interacting with the environment. Phenotype = genotype + environment + their interaction.

In practice

Growers say "this pheno" to mean one individual plant out of a seed pack, as in "the third pheno smelled like fuel". Strictly, that plant is a genotype that showed a particular phenotype in that room. Run the same clone under a different light, feed or pot size and parts of the phenotype shift; the genotype does not.

That is why serious selection means growing candidates side by side, in the same conditions, and ideally repeating the best ones as clones before deciding. A plant that stood out because it sat in the hot spot has a good phenotype but may not have a good genotype.

Don't confuse with

  • Genotype: the DNA. The phenotype is what you see from it.
  • Pheno (slang): shorthand for one seedling or selection; same root, looser use.
  • Chemotype: the chemical part of the phenotype.

Myth check

"Indica phenotype" and "sativa phenotype" describe plant shape at most (broad or narrow leaflets, structure, flowering time). They do not predict chemistry or effect (Watts et al. 2021). See indica, sativa and ruderalis.

Related terms

Sources

  1. Falconer DS, Mackay TFC. 1996. Introduction to Quantitative Genetics, 4th edition. Longman, Harlow. ISBN 978-0-582-24302-6.
  2. Watts S, McElroy M, Migicovsky Z, Maassen H, van Velzen R, Myles S. 2021. Cannabis labelling is associated with genetic variation in terpene synthase genes. Nature Plants 7:1330-1334. doi.org/10.1038/s41477-021-01003-y
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