GenetixBayEST. 2009
Glossary · Genetics and breeding

Genotype by environment interaction

Genotype by environment interaction (GxE) is when different genotypes respond differently to the same change in conditions, so the best cultivar in one room may not be best in another.

Also written GxEG×EGxE interactiongenotype-environment interactionphenotypic plasticity

EstablishedDraft: awaiting expert reviewUpdated

Genotype by environment interaction (GxE) means the effect of the environment depends on the genotype. Two cultivars may rank one way under one light, feed or climate and the other way under another. Phenotypic plasticity is the related idea that one genotype can produce different phenotypes in different conditions.

In practice

GxE is why "test your cultivar" is GenetixBay's stance. One clone may love 24/0 veg and 13/11 flower; another stalls. Some cultivars thrive with a mild late dry-back; others lose yield. One mother handles heavy defoliation; her sister sulks. Ca and Mg demand also varies by cultivar, more than by light type.

For breeders, GxE means selections should be tested in more than one environment before release. A keeper selected under one grower's lights in one climate may disappoint in a cooler, more humid room. Tester grows across many members are a practical way to see GxE.

Don't confuse with

  • Genotype: the DNA, which does not change between rooms.
  • Environmental effect: when every genotype shifts the same way (all plants yield less in a cold room), that is not GxE.
  • Genetic drift: clones do not drift genetically because they are moved to a new room.

Related terms

Sources

  1. Falconer DS, Mackay TFC. 1996. Introduction to Quantitative Genetics, 4th edition. Longman, Harlow. ISBN 978-0-582-24302-6.
  2. Acquaah G. 2012. Principles of Plant Genetics and Breeding, 2nd edition. Wiley-Blackwell. doi.org/10.1002/9781118313718
Professor Greenleaf

Grow with the Professor.

The GenetixBay community is coming: honest grow journals, permanent GB-IDs for genetics, and a Professor who answers with citations. Founding Members get first access and the lowest numbers in the archive.